Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator repa | RG28_RS29940 | Not Available | Positive | 49185 - 50207 | 40184.5 |
| hypothetical protein | RG28_RS29955 | Not Available | Positive | 51110 - 51340 | 8669.29 |
| type ii toxin-antitoxin system pemk/mazf family toxin | RG28_RS29960 | Not Available | Positive | 51327 - 51653 | 11958.6 |
| colicin release lysis protein | RG28_RS29965 | Not Available | Negative | 51881 - 52018 | 4822.1 |
| colicin n immunity protein | RG28_RS29970 | Not Available | Positive | 52046 - 52570 | 20066.1 |
| hypothetical protein | RG28_RS29975 | Not Available | Positive | 52679 - 53380 | 26932.6 |
| hypothetical protein | RG28_RS29985 | Not Available | Negative | 53431 - 53667 | 9040.1 |
| hypothetical protein | RG28_RS29990 | Not Available | Negative | 53667 - 54032 | 13711.2 |
| type ii toxin-antitoxin system rele/pare family toxin | RG28_RS29995 | Not Available | Negative | 54354 - 54677 | 12258.9 |
| antitoxin | RG28_RS30000 | Not Available | Negative | 54674 - 54925 | 9151.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





