Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6862 domain-containing protein | RG28_RS30895 | Not Available | Positive | 18127 - 18302 | 6741.15 |
| duf6862 domain-containing protein | RG28_RS28350 | Not Available | Negative | 18331 - 19155 | 30958.2 |
| duf6862 domain-containing protein | RG28_RS28360 | Not Available | Negative | 19383 - 19586 | 8101.6 |
| duf4238 domain-containing protein | RG28_RS28370 | Not Available | Positive | 20019 - 21128 | 43045.1 |
| type ii toxin-antitoxin system toxin endoribonuclease pemk-mt | RG28_RS28375 | Not Available | Negative | 21284 - 21616 | 11863.5 |
| type ii toxin-antitoxin system antitoxin pemi | RG28_RS31565 | Not Available | Negative | 21618 - 21875 | 9279.11 |
| cpbp family intramembrane glutamic endopeptidase | RG28_RS28385 | Not Available | Negative | 21968 - 22621 | 24290.8 |
| plasmid replication initiator repa | RG28_RS28395 | Not Available | Negative | 23562 - 24584 | 40014.5 |
| plasmid replication initiator repa | RG28_RS28400 | Not Available | Negative | 24574 - 25107 | 19950.2 |
| repa leader peptide tap | RG28_RS28405 | Not Available | Negative | 25100 - 25174 | 2646.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





