Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein trah | RG28_RS29830 | Not Available | Positive | 29262 - 30668 | 51936.3 |
| conjugal transfer mating-pair stabilization protein trag | RG28_RS29835 | Not Available | Positive | 30668 - 33559 | 104943.0 |
| hypothetical protein | RG28_RS29840 | Not Available | Positive | 33574 - 34224 | 24121.5 |
| conjugal transfer complement resistance protein trat | RG28_RS29845 | Not Available | Positive | 34296 - 35033 | 26256.3 |
| hypothetical protein | RG28_RS29850 | Not Available | Positive | 35162 - 35854 | 26292.9 |
| duf2726 domain-containing protein | RG28_RS29855 | Not Available | Positive | 35996 - 36364 | 14413.5 |
| type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapc | RG28_RS29860 | Not Available | Negative | 36381 - 36779 | 14946.2 |
| toxin-antitoxin system antitoxin vapb | RG28_RS29865 | Not Available | Negative | 36779 - 37006 | 8354.75 |
| type iv conjugative transfer system coupling protein trad | RG28_RS29870 | Not Available | Positive | 37139 - 39328 | 83681.7 |
| conjugative transfer relaxase/helicase trai | RG28_RS29875 | Not Available | Positive | 39328 - 44544 | 190389.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





