Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-type conjugal transfer protein trak | RG28_RS29730 | Not Available | Positive | 13759 - 14538 | 27914.7 |
| f-type conjugal transfer pilus assembly protein trab | RG28_RS29735 | Not Available | Positive | 14531 - 15871 | 46895.5 |
| conjugal transfer protein trap | RG28_RS29740 | Not Available | Positive | 15874 - 16284 | 15689.5 |
| hypothetical protein | RG28_RS29745 | Not Available | Positive | 16342 - 16863 | 19802.5 |
| type iv conjugative transfer system lipoprotein trav | RG28_RS29750 | Not Available | Positive | 16901 - 17413 | 18283.6 |
| type iv secretion system protein trac | RG28_RS29755 | Not Available | Positive | 17410 - 20049 | 100201.0 |
| type-f conjugative transfer system protein trbi | RG28_RS29760 | Not Available | Positive | 20028 - 20444 | 14749.8 |
| trar/dksa c4-type zinc finger protein | RG28_RS29765 | Not Available | Positive | 20447 - 20671 | 8752.6 |
| type-f conjugative transfer system protein traw | RG28_RS29770 | Not Available | Positive | 20668 - 21285 | 22948.6 |
| hypothetical protein | RG28_RS29775 | Not Available | Positive | 21282 - 21677 | 15449.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





