Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RG28_RS29675 | Not Available | Positive | 7922 - 8128 | 7408.07 |
| hypothetical protein | RG28_RS29680 | Not Available | Positive | 8152 - 8448 | 10986.1 |
| duf932 domain-containing protein | RG28_RS29685 | Not Available | Positive | 8557 - 9378 | 31712.9 |
| transglycosylase slt domain-containing protein | RG28_RS29690 | Not Available | Negative | 9656 - 10105 | 17295.8 |
| conjugal transfer relaxosome dna-binding protein tram | RG28_RS29700 | Not Available | Positive | 10617 - 11012 | 15367.5 |
| hypothetical protein | RG28_RS29705 | Not Available | Positive | 11172 - 11903 | 28404.3 |
| tray domain-containing protein | RG28_RS29710 | Not Available | Positive | 11987 - 12193 | 7578.27 |
| type iv conjugative transfer system pilin traa | RG28_RS29715 | Not Available | Positive | 12494 - 12865 | 13400.8 |
| type iv conjugative transfer system protein tral | RG28_RS29720 | Not Available | Positive | 12896 - 13195 | 11505.2 |
| type iv conjugative transfer system protein trae | RG28_RS29725 | Not Available | Positive | 13206 - 13784 | 21885.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





