Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radc family protein | RG28_RS29420 | Not Available | Positive | 187944 - 188420 | 17704.4 |
| duf987 domain-containing protein | RG28_RS29425 | Not Available | Positive | 188477 - 188698 | 8471.25 |
| type iv toxin-antitoxin system yeeu family antitoxin | RG28_RS29430 | Not Available | Positive | 188773 - 189141 | 13708.2 |
| type iv toxin-antitoxin system cytoskeleton-binding toxin cbta | RG28_RS29435 | Not Available | Positive | 189231 - 189608 | 14045.9 |
| duf5983 family protein | RG28_RS29440 | Not Available | Positive | 189605 - 190093 | 18019.4 |
| duf957 domain-containing protein | RG28_RS29445 | Not Available | Positive | 190105 - 190302 | 7509.87 |
| duf4942 domain-containing protein | RG28_RS29450 | Not Available | Positive | 190387 - 191232 | 32745.2 |
| duf6088 family protein | RG28_RS29455 | Not Available | Positive | 191301 - 191696 | 14596.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | RG28_RS29460 | Not Available | Positive | 191689 - 192636 | 36242.7 |
| tyrosine-type recombinase/integrase | RG28_RS29465 | Not Available | Positive | 193040 - 194305 | 48008.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





