Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | RG28_RS30890 | Not Available | Negative | 10061 - 10306 | 9594.72 |
| hypothetical protein | RG28_RS31550 | Not Available | Negative | 10354 - 10794 | 16732.3 |
| yfdx family protein | RG28_RS28305 | Not Available | Positive | 11328 - 11945 | 22845.5 |
| duf6862 domain-containing protein | RG28_RS28310 | Not Available | Positive | 12220 - 12498 | 10092.6 |
| is110 family transposase | RG28_RS28315 | Not Available | Negative | 12766 - 13770 | 37161.4 |
| duf6862 domain-containing protein | RG28_RS28320 | Not Available | Positive | 13819 - 14669 | 30432.1 |
| hypothetical protein | RG28_RS31555 | Not Available | Positive | 15216 - 15611 | 14251.0 |
| duf6862 domain-containing protein | RG28_RS32595 | Not Available | Positive | 15624 - 15755 | 4699.93 |
| mipa/ompv family protein | RG28_RS28330 | Not Available | Negative | 16040 - 16786 | 28033.7 |
| duf6862 domain-containing protein | RG28_RS31560 | Not Available | Positive | 17295 - 17810 | 19484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





