Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| papb/focb family fimbrial expression transcriptional regulator | RG28_RS29185 | Not Available | Negative | 146480 - 146674 | 7665.41 |
| is66-like element accessory protein tnpa | RG28_RS29190 | Not Available | Positive | 147529 - 147909 | 14117.0 |
| is66 family insertion sequence element accessory protein tnpb | RG28_RS29195 | Not Available | Positive | 147906 - 148253 | 12771.9 |
| is66-like element isec8 family transposase | RG28_RS29200 | Not Available | Positive | 148303 - 149841 | 57768.1 |
| eal domain-containing protein | RG28_RS29205 | Not Available | Negative | 150205 - 150963 | 29341.0 |
| helix-turn-helix domain-containing protein | RG28_RS29210 | Not Available | Negative | 151833 - 154157 | 89401.0 |
| m20 aminoacylase family protein | RG28_RS29215 | Not Available | Positive | 154358 - 155515 | 42480.6 |
| mfs transporter | RG28_RS29220 | Not Available | Positive | 155664 - 157076 | 49470.1 |
| hypothetical protein | RG28_RS32005 | Not Available | Negative | 157625 - 157777 | 5936.43 |
| ankyrin repeat domain-containing protein | RG28_RS29225 | Not Available | Negative | 157932 - 160844 | 111347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





