Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | RG28_RS28955 | Not Available | Negative | 102827 - 103567 | 28137.4 |
| transcriptional regulator | RG28_RS28960 | Not Available | Negative | 103688 - 103858 | 6521.85 |
| fimbrial chaperone | RG28_RS28970 | Not Available | Negative | 105069 - 105761 | 25562.2 |
| pefc/afrb family outer membrane usher protein | RG28_RS28975 | Not Available | Negative | 105754 - 108162 | 87227.0 |
| fimbrial protein | RG28_RS28980 | Not Available | Negative | 108361 - 108894 | 18033.1 |
| hypothetical protein | RG28_RS28990 | Not Available | Negative | 109659 - 110246 | 20476.4 |
| hypothetical protein | RG28_RS28995 | Not Available | Positive | 111619 - 111948 | 12163.7 |
| hypothetical protein | RG28_RS29000 | Not Available | Negative | 112276 - 113094 | 29456.2 |
| fimbrial chaperone | RG28_RS29010 | Not Available | Negative | 113544 - 114239 | 26127.7 |
| hypothetical protein | RG28_RS29015 | Not Available | Positive | 115298 - 116335 | 37545.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





