Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning/stability family protein | RG28_RS28845 | Not Available | Negative | 84031 - 84447 | 15408.2 |
| plasmid segregation protein parm | RG28_RS28850 | Not Available | Negative | 84440 - 85420 | 36199.2 |
| molecular chaperone groel | RG28_RS28855 | Not Available | Negative | 85832 - 86140 | 10954.9 |
| para family protein | RG28_RS28860 | Not Available | Negative | 86227 - 86871 | 23348.4 |
| duf6862 domain-containing protein | RG28_RS28865 | Not Available | Negative | 87051 - 87859 | 27926.3 |
| type ii toxin-antitoxin system toxin ccdb | RG28_RS28870 | Not Available | Negative | 87860 - 88165 | 11707.2 |
| type ii toxin-antitoxin system antitoxin ccda | RG28_RS28875 | Not Available | Negative | 88167 - 88385 | 8372.8 |
| is3 family transposase | RG28_RS30920 | Not Available | Positive | 88633 - 90170 | 59552.5 |
| hypothetical protein | RG28_RS28890 | Not Available | Negative | 90644 - 94450 | 144326.0 |
| type ii toxin-antitoxin system yhav family toxin | RG28_RS28895 | Not Available | Negative | 94632 - 95126 | 19276.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





