Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina barkeri |
| Strain | MS |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina barkeri MS plasmid unnamed, complete sequence.
Gene Summary
Adenine Count
13303 bp
Thymine Count
13448 bp
Guanine Count
7574 bp
Cytosine Count
7373 bp
Genome Length
41698 bp
Protein-coding Genes
23 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 56976 - 57047 | Not Available |
| endonuclease iii domain-containing protein | MSBRM_RS00350 | Not Available | Positive | 57285 - 57899 | 23356.4 |
| bifunctional 5,6,7,8-tetrahydromethanopterin hydro-lyase/3-hexulose-6-phosphate synthase | MSBRM_RS00355 | Not Available | Positive | 58159 - 59337 | 42435.5 |
| triose-phosphate isomerase | MSBRM_RS00360 | Not Available | Positive | 59510 - 60178 | 22803.5 |
| heat repeat domain-containing protein | MSBRM_RS00365 | Not Available | Negative | 60175 - 63051 | 103499.0 |
| heat repeat domain-containing protein | MSBRM_RS00370 | Not Available | Negative | 64398 - 65948 | 56028.6 |
| prephenate dehydrogenase | MSBRM_RS00375 | Not Available | Negative | 66047 - 67495 | 54252.7 |
| shikimate dehydrogenase | MSBRM_RS00380 | Not Available | Negative | 67582 - 68424 | 29445.8 |
| type i 3-dehydroquinate dehydratase | MSBRM_RS00385 | Not Available | Negative | 68421 - 69164 | 27026.9 |
| 3-dehydroquinate synthase ii | MSBRM_RS00390 | Not Available | Negative | 69296 - 70438 | 41350.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
