Rhodococcus opacus strain 1CP

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus strain 1CP is a Gram-positive, mesophilic bacterium characterized by its filamentous cell arrangement and cocci shape. As an aerobic organism, it requires oxygen for growth and does not exhibit mobility, lacking flagella despite their presence. This strain possesses three replicons and is surrounded by a single membrane. Rhodococcus species are known for their diverse metabolic capabilities, particularly in degrading organic compounds, which may suggest ecological roles in bioremediation. R. opacus strain 1CP’s free-living biotic relationship allows it to thrive in various environments, potentially contributing to soil health and nutrient cycling. The accessions for this strain are NZ_CP009113.1, NZ_CP009111.1, and NZ_CP009112.1, which provide valuable resources for genomic studies and further research into its metabolic pathways and applications. Understanding the traits of R. opacus strain 1CP can offer insights into its ecological importance, especially in environments impacted by pollutants, where its capacity to metabolize complex organic substances may aid in environmental recovery processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
Strainstrain 1CP

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus strain 1CP
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

801 genes

Non-Coding Genes

3 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseR1CP_RS10955Not AvailableNegative2415632 - 241658532711.0
smp-30/gluconolactonase/lre family proteinR1CP_RS10960Not AvailablePositive2416726 - 241767931886.9
succinyl-diaminopimelate desuccinylaseR1CP_RS10965Not AvailablePositive2417721 - 241879438018.8
tigr00730 family rossman fold proteinR1CP_RS10970Not AvailablePositive2418837 - 241963429226.4
tigr00730 family rossman fold proteinR1CP_RS10975Not AvailablePositive2419634 - 242019119670.6
long-chain-acyl-coa synthetaseR1CP_RS10980Not AvailablePositive2420276 - 242205164651.7
dihydropteroate synthaseR1CP_RS10985Not AvailablePositive2422146 - 242304531699.7
glucosyl-3-phosphoglycerate synthaseR1CP_RS10990Not AvailablePositive2423075 - 242400132683.3
diviva domain-containing proteinR1CP_RS10995Not AvailablePositive2424054 - 242436510896.1
dna-3-methyladenine glycosylase iR1CP_RS11000Not AvailablePositive2424362 - 242493721443.4

Displaying genes 3041 – 3050 of 7995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.