Rhodococcus opacus strain 1CP

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus strain 1CP is a Gram-positive, mesophilic bacterium characterized by its filamentous cell arrangement and cocci shape. As an aerobic organism, it requires oxygen for growth and does not exhibit mobility, lacking flagella despite their presence. This strain possesses three replicons and is surrounded by a single membrane. Rhodococcus species are known for their diverse metabolic capabilities, particularly in degrading organic compounds, which may suggest ecological roles in bioremediation. R. opacus strain 1CP’s free-living biotic relationship allows it to thrive in various environments, potentially contributing to soil health and nutrient cycling. The accessions for this strain are NZ_CP009113.1, NZ_CP009111.1, and NZ_CP009112.1, which provide valuable resources for genomic studies and further research into its metabolic pathways and applications. Understanding the traits of R. opacus strain 1CP can offer insights into its ecological importance, especially in environments impacted by pollutants, where its capacity to metabolize complex organic substances may aid in environmental recovery processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
Strainstrain 1CP

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus strain 1CP
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

801 genes

Non-Coding Genes

3 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone htpgR1CP_RS10525Not AvailablePositive2321496 - 232342472563.5
sdr family nad(p)-dependent oxidoreductaseR1CP_RS10530Not AvailablePositive2323431 - 232442034443.4
mismatch-specific dna-glycosylaseR1CP_RS10535Not AvailablePositive2324440 - 232500919995.8
hypothetical proteinR1CP_RS10540Not AvailablePositive2325035 - 232538512336.6
acyl-coa dehydrogenase family proteinR1CP_RS10545Not AvailableNegative2325398 - 232679250546.5
class i sam-dependent methyltransferaseR1CP_RS10550Not AvailablePositive2326924 - 232773329664.6
l,d-transpeptidaseR1CP_RS10555Not AvailablePositive2327786 - 232845423148.3
fumarate hydrataseR1CP_RS10560Not AvailableNegative2328515 - 233021261152.0
cpbp family intramembrane glutamic endopeptidaseR1CP_RS10565Not AvailablePositive2330390 - 233116026533.0
esterase/lipase family proteinR1CP_RS10570Not AvailableNegative2331170 - 233241444221.8

Displaying genes 2951 – 2960 of 7995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.