Rhodococcus opacus strain 1CP

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus strain 1CP is a Gram-positive, mesophilic bacterium characterized by its filamentous cell arrangement and cocci shape. As an aerobic organism, it requires oxygen for growth and does not exhibit mobility, lacking flagella despite their presence. This strain possesses three replicons and is surrounded by a single membrane. Rhodococcus species are known for their diverse metabolic capabilities, particularly in degrading organic compounds, which may suggest ecological roles in bioremediation. R. opacus strain 1CP’s free-living biotic relationship allows it to thrive in various environments, potentially contributing to soil health and nutrient cycling. The accessions for this strain are NZ_CP009113.1, NZ_CP009111.1, and NZ_CP009112.1, which provide valuable resources for genomic studies and further research into its metabolic pathways and applications. Understanding the traits of R. opacus strain 1CP can offer insights into its ecological importance, especially in environments impacted by pollutants, where its capacity to metabolize complex organic substances may aid in environmental recovery processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
Strainstrain 1CP

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus strain 1CP
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

801 genes

Non-Coding Genes

3 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urease subunit alphaR1CP_RS09575Not AvailablePositive2113601 - 211532260397.1
urease accessory protein urefR1CP_RS09580Not AvailablePositive2115322 - 211595422002.4
urease accessory protein uregR1CP_RS09585Not AvailablePositive2115989 - 211667524407.1
urease accessory protein uredR1CP_RS09590Not AvailablePositive2116678 - 211733122741.1
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseR1CP_RS09595Not AvailablePositive2117405 - 211834031749.9
abc-f family atp-binding cassette domain-containing proteinR1CP_RS09600Not AvailablePositive2118340 - 212012464752.3
acetyl-coa acetyltransferaseR1CP_RS09605Not AvailableNegative2120147 - 212164351739.2
nuclear transport factor 2 family proteinR1CP_RS09610Not AvailablePositive2122074 - 212255018037.1
voc family proteinR1CP_RS09615Not AvailablePositive2122597 - 212301014566.4
pyridoxal 5'-phosphate synthaseR1CP_RS09620Not AvailablePositive2123039 - 212371624840.9

Displaying genes 2761 – 2770 of 7995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.