Rhodococcus opacus PD630

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus PD630 is a Gram-positive, aerobic bacterium characterized by its cocci shape and filamentous cell arrangement. This organism exhibits a mesophilic temperature range, indicating optimal growth at moderate temperatures. It is non-motile, lacking flagella, which suggests a sedentary lifestyle in its habitat. Rhodococcus opacus PD630 is notable for its genetic complexity, possessing ten replicons, which may contribute to its adaptability and metabolic versatility. It features a single membrane structure, characteristic of many bacteria in its class. This organism is free-living, highlighting its independence from host organisms and its capability to thrive in diverse environments. The strain is recognized for its biotechnological potential, particularly in the degradation of organic pollutants and the production of valuable bioproducts, including biofuels. Its ability to utilize a variety of carbon sources makes it an important player in bioremediation efforts and in the broader context of environmental microbiology. In summary, Rhodococcus opacus PD630 represents a significant member of the microbial community with its unique traits that facilitate its survival and utility in various ecological niches. Its adaptability and metabolic capabilities underscore the importance of studying such organisms in understanding microbial roles in ecosystem dynamics and bioremediation processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainPD630

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus PD630
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

16413 bp

Thymine Count

18829 bp

Guanine Count

31208 bp

Cytosine Count

31138 bp

Genome Length

97588 bp

Protein-coding Genes

94 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(2fe-2s)-binding proteinPD630_RS35130Not AvailableNegative7768301 - 776880717691.9
xanthine dehydrogenase family protein subunit mPD630_RS35135Not AvailableNegative7768804 - 776965830040.8
nad-glutamate dehydrogenase domain-containing proteinPD630_RS35140Not AvailableNegative7769844 - 7773026116124.0
4-aminobutyrate--2-oxoglutarate transaminasePD630_RS35145Not AvailablePositive7773191 - 777454947929.2
aldehyde dehydrogenase family proteinPD630_RS35150Not AvailablePositive7774581 - 777604751098.6
antibiotic biosynthesis monooxygenasePD630_RS35155Not AvailableNegative7776316 - 777662411708.6
sigma factor-like helix-turn-helix dna-binding proteinPD630_RS35160Not AvailableNegative7776752 - 77769918268.08
hypothetical proteinPD630_RS35165Not AvailablePositive7777123 - 777789028305.1
dmt family transporterPD630_RS35170Not AvailableNegative7777863 - 777821011624.3
fdhf/ydep family oxidoreductasePD630_RS35175Not AvailableNegative7778342 - 778071787215.6

Displaying genes 7261 – 7270 of 8400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.