Rhodococcus opacus PD630

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus PD630 is a Gram-positive, aerobic bacterium characterized by its cocci shape and filamentous cell arrangement. This organism exhibits a mesophilic temperature range, indicating optimal growth at moderate temperatures. It is non-motile, lacking flagella, which suggests a sedentary lifestyle in its habitat. Rhodococcus opacus PD630 is notable for its genetic complexity, possessing ten replicons, which may contribute to its adaptability and metabolic versatility. It features a single membrane structure, characteristic of many bacteria in its class. This organism is free-living, highlighting its independence from host organisms and its capability to thrive in diverse environments. The strain is recognized for its biotechnological potential, particularly in the degradation of organic pollutants and the production of valuable bioproducts, including biofuels. Its ability to utilize a variety of carbon sources makes it an important player in bioremediation efforts and in the broader context of environmental microbiology. In summary, Rhodococcus opacus PD630 represents a significant member of the microbial community with its unique traits that facilitate its survival and utility in various ecological niches. Its adaptability and metabolic capabilities underscore the importance of studying such organisms in understanding microbial roles in ecosystem dynamics and bioremediation processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainPD630

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus PD630
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

16413 bp

Thymine Count

18829 bp

Guanine Count

31208 bp

Cytosine Count

31138 bp

Genome Length

97588 bp

Protein-coding Genes

94 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucyl aminopeptidasePD630_RS24415Not AvailablePositive5433233 - 543475051858.8
hypothetical proteinPD630_RS24420Not AvailableNegative5434818 - 543515613055.4
2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferasePD630_RS24425Not AvailablePositive5435486 - 543722558830.1
tigr01777 family oxidoreductasePD630_RS24430Not AvailablePositive5437317 - 543820731182.1
lipoyl(octanoyl) transferase lipbPD630_RS24435Not AvailablePositive5438256 - 543903227644.6
lipoyl synthasePD630_RS24440Not AvailablePositive5439085 - 544009537702.8
duf4191 domain-containing proteinPD630_RS24445Not AvailablePositive5440169 - 544092727204.7
rdd family proteinPD630_RS24450Not AvailableNegative5440993 - 544146916682.3
type i glutamate--ammonia ligasePD630_RS24455Not AvailablePositive5441681 - 544311753486.4
dna alkylation repair proteinPD630_RS24460Not AvailableNegative5443285 - 544397125629.7

Displaying genes 5091 – 5100 of 8400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.