Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus opacus |
| Strain | PD630 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus opacus PD630 plasmid 2, complete sequence.
Gene Summary
Adenine Count
16413 bp
Thymine Count
18829 bp
Guanine Count
31208 bp
Cytosine Count
31138 bp
Genome Length
97588 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yafy family protein | PD630_RS22860 | Not Available | Negative | 5102914 - 5103879 | 34689.9 |
| pup--protein ligase | PD630_RS22865 | Not Available | Negative | 5103954 - 5105297 | 50580.1 |
| phosphatase pap2 family protein | PD630_RS22870 | Not Available | Positive | 5105386 - 5106852 | 51790.2 |
| proteasome subunit alpha | PD630_RS22875 | Not Available | Negative | 5106843 - 5107622 | 28323.5 |
| proteasome subunit beta | PD630_RS22880 | Not Available | Negative | 5107619 - 5108503 | 31066.2 |
| ubiquitin-like protein pup | PD630_RS22885 | Not Available | Negative | 5108500 - 5108694 | 6956.65 |
| depupylase/deamidase dop | PD630_RS22890 | Not Available | Negative | 5108865 - 5110364 | 54603.8 |
| nitroreductase family deazaflavin-dependent oxidoreductase | PD630_RS22895 | Not Available | Negative | 5110439 - 5110816 | 13824.6 |
| nudix domain-containing protein | PD630_RS22900 | Not Available | Positive | 5110899 - 5111384 | 17426.2 |
| proteasome atpase | PD630_RS22905 | Not Available | Negative | 5111513 - 5113288 | 65837.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
