Weissella paramesenteroides strain WpK4

Gram-positiveCoccusFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella paramesenteroides strain WpK4 is a Gram-positive, facultative anaerobic coccus predominantly found in the habitat of dry naturally fermented Greek sausage. This strain exhibits a characteristic cell arrangement of chains and pairs, which is typical of certain lactic acid bacteria. The strain has been documented with six replicons, indicating a complex genomic structure that may contribute to its metabolic versatility in fermented environments. Its association with Oryctolagus cuniculus (the European rabbit) suggests potential interactions or symbiotic relationships that may influence microbial communities in the gastrointestinal tract of this host. The presence of multiple genomic accessions, including NZ_CM014767.1, NZ_CM014768.1, NZ_CM014769.1, NZ_CM014770.1, SGAX00000000.1, and NZ_CM014771.1, highlights the strain's genetic diversity and facilitates further research into its functional roles in fermentation and potential applications in food science. In summary, Weissella paramesenteroides strain WpK4 plays a significant role in the fermentation process of traditional Greek sausages, contributing to flavor development and preservation. Its specific traits enable it to thrive in anaerobic conditions while interacting with specific hosts, illustrating the intricate relationship between microbial life and traditional food production practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella paramesenteroides
Strainstrain WpK4

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdry naturally fermented Greek sausage
Biotic relationshipNot Available
Host(s)Oryctolagus cuniculus
Cell arrangementChains; Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Weissella paramesenteroides strain WpK4


Gene Summary

Adenine Count

1202 bp

Thymine Count

1392 bp

Guanine Count

671 bp

Cytosine Count

944 bp

Genome Length

4209 bp

Protein-coding Genes

4 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseEWR19_RS00005Not AvailableNegative413 - 128832208.3
replication proteinEWR19_RS00010Not AvailableNegative1443 - 213226732.1
ribbon-helix-helix protein, copg familyEWR19_RS00015Not AvailableNegative2205 - 23605834.04
mobv family relaxaseEWR19_RS00020Not AvailableNegative2956 - 404142212.7
site-specific integraseEWR19_RS00265Not AvailableNegative199 - 78922486.1
abiv family abortive infection proteinEWR19_RS00270Not AvailableNegative803 - 139922640.6
glycoside hydrolase family 70 proteinEWR19_RS00275Not AvailableNegative1599 - 6638184338.0
hypothetical proteinEWR19_RS00280Not AvailablePositive7958 - 82069014.76
dna-binding proteinEWR19_RS00285Not AvailableNegative8289 - 886722565.6
repb family plasmid replication initiator proteinEWR19_RS00290Not AvailableNegative8860 - 1001445321.4

Displaying genes 1 – 10 of 1899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

154 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 154 metabolites

Health Effects

No health effects information available for this bacterium.