Rhodococcus aetherivorans strain BCP1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus aetherivorans strain BCP1 is a notable bacterium characterized by the presence of flagella, which suggests potential motility that may facilitate its environmental adaptability. This strain is distinguished by having a complex genomic structure with four replicons, indicating a potentially intricate regulatory and metabolic network. The genomic data for Rhodococcus aetherivorans strain BCP1 can be accessed through several accession numbers: NZ_CM002177.1, NZ_CM002178.1, NZ_CM002179.1, and AVAE00000000.1. These sequences may provide insights into its genetic composition and functional capabilities, as well as its evolutionary relationships with other Rhodococcus species. Rhodococcus species are known for their metabolic versatility, particularly in degrading a wide range of organic compounds. The presence of multiple replicons in strain BCP1 may enhance its adaptability to diverse environmental conditions, allowing it to thrive in varied ecological niches. This genetic complexity might also play a role in the bacterium's ability to metabolize pollutants, contributing to bioremediation processes. Overall, the traits of Rhodococcus aetherivorans strain BCP1 highlight its potential ecological significance, particularly in the context of bioremediation and environmental microbiology. The interplay between its motility, genomic architecture, and metabolic capabilities positions this strain as a potentially valuable organism for further research and application in environmental science.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus aetherivorans
Strainstrain BCP1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus aetherivorans strain BCP1 plasmid pBMC1 scaffold00002,

Gene Summary

Adenine Count

18679 bp

Thymine Count

18210 bp

Guanine Count

41221 bp

Cytosine Count

41044 bp

Genome Length

120373 bp

Protein-coding Genes

109 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate kinaseN505_RS00390Not AvailableNegative84763 - 8625953391.0
glycerate kinaseN505_RS00395Not AvailableNegative86342 - 8751440326.0
c4-dicarboxylate transporter dctaN505_RS00400Not AvailableNegative87550 - 8903152966.2
tartrate dehydrogenaseN505_RS00405Not AvailableNegative89144 - 9023838922.9
lysr family transcriptional regulatorN505_RS00410Not AvailablePositive90440 - 9138433931.1
slc13 family permeaseN505_RS00415Not AvailablePositive91509 - 9311655910.5
trehalose-phosphataseN505_RS00425Not AvailablePositive93399 - 97358146774.0
tigr02611 family proteinN505_RS00430Not AvailableNegative97374 - 9777515008.6
hypothetical proteinN505_RS00435Not AvailableNegative97981 - 9832811400.6
patatin-like phospholipase family proteinN505_RS00440Not AvailableNegative98441 - 9951439043.0

Displaying genes 251 – 260 of 11359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

121 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 121 metabolites

Health Effects

No health effects information available for this bacterium.