Synechococcus sp. NIES-970

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Picosynechococcus

Description

Synechococcus sp. NIES-970 is characterized by having two replicons, which is notable among cyanobacteria. This strain is cataloged under the accession numbers NZ_AP017960.1 and NZ_AP017962.1, providing a basis for genetic and genomic studies. Cyanobacteria, including Synechococcus species, are essential components of aquatic ecosystems and play a significant role in carbon fixation and oxygen production through photosynthesis. The dual replicon structure of Synechococcus sp. NIES-970 could indicate a complex regulatory mechanism for gene expression and replication, which may contribute to its adaptability in various environments. The presence of multiple replicons can enhance the organism's ability to respond to environmental changes, potentially allowing for more efficient resource utilization and survival in fluctuating conditions. This adaptability is crucial for cyanobacteria, which often inhabit diverse aquatic habitats. Understanding the genetic makeup and replicon structure of Synechococcus sp. NIES-970 can provide insights into its ecological role and its contributions to primary production in marine and freshwater ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusPicosynechococcus
Species[Synechococcus] sp. NIES-970
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete

Gene Summary

Adenine Count

37619 bp

Thymine Count

37308 bp

Guanine Count

32034 bp

Cytosine Count

31508 bp

Genome Length

138469 bp

Protein-coding Genes

114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal phosphate-dependent decarboxylase family proteinNIES970_RS13830Not AvailableNegative94026 - 9551955328.5
aspartate aminotransferase family proteinNIES970_RS13835Not AvailableNegative95616 - 9701950379.0
porphobilinogen synthaseNIES970_RS13840Not AvailablePositive97448 - 9844936370.0
gtp cyclohydrolase i foleNIES970_RS13845Not AvailablePositive98553 - 9919123626.8
metallophosphataseNIES970_RS13850Not AvailableNegative99286 - 10003827425.8
metallophosphoesterase family proteinNIES970_RS13855Not AvailableNegative100043 - 10086730637.3
transposaseNIES970_RS13860Not AvailableNegative101300 - 10174016474.7
transposaseNIES970_RS13865Not AvailablePositive101846 - 10308346685.7
doda-type extradiol aromatic ring-opening family dioxygenaseNIES970_RS13870Not AvailableNegative103130 - 10392729371.2
transposaseNIES970_RS13875Not AvailableNegative103977 - 1041988758.46

Displaying genes 81 – 90 of 181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.