Synechococcus sp. NIES-970

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Picosynechococcus

Description

Synechococcus sp. NIES-970 is characterized by having two replicons, which is notable among cyanobacteria. This strain is cataloged under the accession numbers NZ_AP017960.1 and NZ_AP017962.1, providing a basis for genetic and genomic studies. Cyanobacteria, including Synechococcus species, are essential components of aquatic ecosystems and play a significant role in carbon fixation and oxygen production through photosynthesis. The dual replicon structure of Synechococcus sp. NIES-970 could indicate a complex regulatory mechanism for gene expression and replication, which may contribute to its adaptability in various environments. The presence of multiple replicons can enhance the organism's ability to respond to environmental changes, potentially allowing for more efficient resource utilization and survival in fluctuating conditions. This adaptability is crucial for cyanobacteria, which often inhabit diverse aquatic habitats. Understanding the genetic makeup and replicon structure of Synechococcus sp. NIES-970 can provide insights into its ecological role and its contributions to primary production in marine and freshwater ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusPicosynechococcus
Species[Synechococcus] sp. NIES-970
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. NIES-970 plasmid plasmid3 DNA, complete

Gene Summary

Adenine Count

17491 bp

Thymine Count

18971 bp

Guanine Count

14217 bp

Cytosine Count

14945 bp

Genome Length

65624 bp

Protein-coding Genes

67 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfite exporter taue/safe family proteinNIES970_RS13430Not AvailablePositive360 - 125631830.6
molybdate abc transporter substrate-binding proteinNIES970_RS13435Not AvailablePositive1367 - 218829509.1
molybdate abc transporter permease subunitNIES970_RS13440Not AvailablePositive2218 - 407468851.7
tyrosine-type recombinase/integraseNIES970_RS13445Not AvailableNegative4218 - 509033152.8
transposaseNIES970_RS13450Not AvailableNegative5130 - 53247388.08
udp-n-acetylglucosamine 4,6-dehydratase (inverting)NIES970_RS13455Not AvailablePositive5868 - 688137766.4
udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminaseNIES970_RS13460Not AvailablePositive6881 - 804744236.8
cytidylyltransferase domain-containing proteinNIES970_RS13465Not AvailablePositive8044 - 878128770.3
duf29 domain-containing proteinNIES970_RS13470Not AvailableNegative8861 - 926516118.1
udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolaseNIES970_RS13475Not AvailablePositive9311 - 1036038932.3

Displaying genes 1 – 10 of 181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.