Synechococcus sp. NIES-970

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Picosynechococcus

Description

Synechococcus sp. NIES-970 is characterized by having two replicons, which is notable among cyanobacteria. This strain is cataloged under the accession numbers NZ_AP017960.1 and NZ_AP017962.1, providing a basis for genetic and genomic studies. Cyanobacteria, including Synechococcus species, are essential components of aquatic ecosystems and play a significant role in carbon fixation and oxygen production through photosynthesis. The dual replicon structure of Synechococcus sp. NIES-970 could indicate a complex regulatory mechanism for gene expression and replication, which may contribute to its adaptability in various environments. The presence of multiple replicons can enhance the organism's ability to respond to environmental changes, potentially allowing for more efficient resource utilization and survival in fluctuating conditions. This adaptability is crucial for cyanobacteria, which often inhabit diverse aquatic habitats. Understanding the genetic makeup and replicon structure of Synechococcus sp. NIES-970 can provide insights into its ecological role and its contributions to primary production in marine and freshwater ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusPicosynechococcus
Species[Synechococcus] sp. NIES-970
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete

Gene Summary

Adenine Count

37619 bp

Thymine Count

37308 bp

Guanine Count

32034 bp

Cytosine Count

31508 bp

Genome Length

138469 bp

Protein-coding Genes

114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNIES970_RS13680Not AvailableNegative59790 - 6094144361.5
dmt family transporterNIES970_RS13685Not AvailableNegative61375 - 6232233828.0
tvp38/tmem64 family proteinNIES970_RS13690Not AvailablePositive62715 - 6343125435.6
2'-5' rna ligase family proteinNIES970_RS13695Not AvailablePositive63496 - 6402320181.2
nucleoside deaminaseNIES970_RS13700Not AvailableNegative64020 - 6459520838.1
parb/repb/spo0j family partition proteinNIES970_RS13705Not AvailableNegative64701 - 6545628254.1
para family proteinNIES970_RS13710Not AvailableNegative65456 - 6604321093.2
hnh endonucleaseNIES970_RS13715Not AvailableNegative66146 - 6645111647.1
2-hydroxyacid dehydrogenaseNIES970_RS13720Not AvailablePositive66609 - 6760136471.9
type ii toxin-antitoxin system rele/pare family toxinNIES970_RS13725Not AvailablePositive67742 - 6807412800.3

Displaying genes 51 – 60 of 181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.