Synechococcus sp. NIES-970

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Picosynechococcus

Description

Synechococcus sp. NIES-970 is characterized by having two replicons, which is notable among cyanobacteria. This strain is cataloged under the accession numbers NZ_AP017960.1 and NZ_AP017962.1, providing a basis for genetic and genomic studies. Cyanobacteria, including Synechococcus species, are essential components of aquatic ecosystems and play a significant role in carbon fixation and oxygen production through photosynthesis. The dual replicon structure of Synechococcus sp. NIES-970 could indicate a complex regulatory mechanism for gene expression and replication, which may contribute to its adaptability in various environments. The presence of multiple replicons can enhance the organism's ability to respond to environmental changes, potentially allowing for more efficient resource utilization and survival in fluctuating conditions. This adaptability is crucial for cyanobacteria, which often inhabit diverse aquatic habitats. Understanding the genetic makeup and replicon structure of Synechococcus sp. NIES-970 can provide insights into its ecological role and its contributions to primary production in marine and freshwater ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusPicosynechococcus
Species[Synechococcus] sp. NIES-970
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete

Gene Summary

Adenine Count

37619 bp

Thymine Count

37308 bp

Guanine Count

32034 bp

Cytosine Count

31508 bp

Genome Length

138469 bp

Protein-coding Genes

114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNIES970_RS14605Not AvailablePositive41064 - 4135711009.1
helix-turn-helix transcriptional regulatorNIES970_RS14610Not AvailablePositive41716 - 4269338223.5
hypothetical proteinNIES970_RS14615Not AvailablePositive42694 - 4335524475.1
crispr-associated helicase/endonuclease cas3NIES970_RS14620Not AvailablePositive43345 - 4563986280.0
type i-myxan crispr-associated cas8a1/cmx1NIES970_RS14625Not AvailablePositive45636 - 4712957299.9
type i-b crispr-associated protein cas7/cst2/devrNIES970_RS14630Not AvailablePositive47174 - 4803432060.9
hypothetical proteinNIES970_RS14635Not AvailablePositive48050 - 482808909.64
type ii toxin-antitoxin system vapc family toxinNIES970_RS14640Not AvailablePositive48277 - 4866314480.9
crispr-associated protein cas5NIES970_RS14645Not AvailablePositive48680 - 4930924067.7
hypothetical proteinNIES970_RS14650Not AvailablePositive49328 - 495889691.37

Displaying genes 161 – 170 of 181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.