Synechococcus sp. NIES-970

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Picosynechococcus

Description

Synechococcus sp. NIES-970 is characterized by having two replicons, which is notable among cyanobacteria. This strain is cataloged under the accession numbers NZ_AP017960.1 and NZ_AP017962.1, providing a basis for genetic and genomic studies. Cyanobacteria, including Synechococcus species, are essential components of aquatic ecosystems and play a significant role in carbon fixation and oxygen production through photosynthesis. The dual replicon structure of Synechococcus sp. NIES-970 could indicate a complex regulatory mechanism for gene expression and replication, which may contribute to its adaptability in various environments. The presence of multiple replicons can enhance the organism's ability to respond to environmental changes, potentially allowing for more efficient resource utilization and survival in fluctuating conditions. This adaptability is crucial for cyanobacteria, which often inhabit diverse aquatic habitats. Understanding the genetic makeup and replicon structure of Synechococcus sp. NIES-970 can provide insights into its ecological role and its contributions to primary production in marine and freshwater ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusPicosynechococcus
Species[Synechococcus] sp. NIES-970
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete

Gene Summary

Adenine Count

37619 bp

Thymine Count

37308 bp

Guanine Count

32034 bp

Cytosine Count

31508 bp

Genome Length

138469 bp

Protein-coding Genes

114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
parb/repb/spo0j family partition proteinNIES970_RS14555Not AvailablePositive35369 - 3626833982.0
transposaseNIES970_RS14560Not AvailableNegative36555 - 367678605.46
duf433 domain-containing proteinNIES970_RS14565Not AvailableNegative36973 - 372098423.26
higa family addiction module antitoxinNIES970_RS14570Not AvailableNegative37317 - 3762211667.2
hypothetical proteinNIES970_RS14575Not AvailableNegative37635 - 3793010680.2
hypothetical proteinNIES970_RS14580Not AvailableNegative38159 - 383838532.04
type ii toxin-antitoxin system vapc family toxinNIES970_RS14585Not AvailableNegative38747 - 3912414417.5
type ii toxin-antitoxin system phd/yefm family antitoxinNIES970_RS14590Not AvailableNegative39127 - 393608457.12
tyrosine-type recombinase/integraseNIES970_RS14595Not AvailablePositive39444 - 4031633162.8
hypothetical proteinNIES970_RS14600Not AvailablePositive40405 - 4087517928.7

Displaying genes 151 – 160 of 181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.