Escherichia coli strain 2009-30

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 2009-30 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility, attributed to the presence of flagella. It typically arranges in pairs or singles and thrives optimally at 37°C, classifying it as mesophilic. This strain is distinguished by having a single replicon and two membranes, characteristic of its Gram-negative nature. E. coli strain 2009-30 is predominantly host-associated, showing a wide range of potential hosts that include various species across multiple taxonomic groups, such as Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and many others, including mammals, birds, and even some invertebrates like Apis mellifera (honeybees) and certain plant species such as Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). This strain is known for its pathogenicity in humans, being implicated in a multitude of health issues including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as hemolytic uremic syndrome (HUS), which can lead to renal failure. The strain is associated with various health effects like diarrhea, neonatal meningitis, and even complications such as septicemia and peritonitis. The extensive host range and pathogenic potential of E. coli strain 2009-30 underscore its ecological versatility. Its ability to inhabit diverse environments and cause significant health issues in both humans and animals highlights the intricate relationships between microbial life and host health, emphasizing the importance of monitoring such strains in both clinical and ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 2009-30

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 2009-30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 2009-30


Gene Summary

Adenine Count

1309359 bp

Thymine Count

1314113 bp

Guanine Count

1340305 bp

Cytosine Count

1355047 bp

Genome Length

5319417 bp

Protein-coding Genes

4965 genes

Non-Coding Genes

357 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive54254 - 54265Not Available
Putative dna-binding response regulatorCRX46_00235Not AvailablePositive58445 - 5916727657.5
duf1508 domain-containing proteinCRX46_00240Not AvailablePositive59347 - 5967911994.9
u32 family peptidaseCRX46_00245Not AvailablePositive59827 - 6118851212.1
Putative positive regulator of late gene transcriptionCRX46_00250Not AvailableNegative61461 - 617159656.61
Tail proteinCRX46_00255Not AvailableNegative61761 - 6292442801.0
Tail proteinCRX46_00260Not AvailableNegative62924 - 6340317435.3
Tail length determinatorCRX46_00265Not AvailableNegative63418 - 6586586504.9
Putative phage tail proteinCRX46_00270Not AvailableNegative65858 - 659774560.46
Tail proteinCRX46_00275Not AvailableNegative66010 - 662859694.9

Displaying genes 1 – 10 of 5322 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total