Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4760 domain-containing protein | CRX46_17380 | Not Available | Negative | 3363103 - 3363600 | 19373.4 |
| Pbsx family portal protein | CRX46_17385 | Not Available | Negative | 3364250 - 3365296 | 39273.1 |
| Helix-turn-helix domain-containing protein | CRX46_17390 | Not Available | Negative | 3365296 - 3367047 | 66875.4 |
| Capsid scaffolding protein | CRX46_17395 | Not Available | Positive | 3367202 - 3368038 | 30368.9 |
| Major capsid protein, p2 family | CRX46_17400 | Not Available | Positive | 3368062 - 3369114 | 39220.4 |
| Terminase endonuclease subunit | CRX46_17405 | Not Available | Positive | 3369160 - 3369960 | 28895.5 |
| Head completion-stabilization protein | CRX46_17410 | Not Available | Positive | 3370062 - 3370556 | 18333.5 |
| Tail protein x | CRX46_17415 | Not Available | Positive | 3370556 - 3370756 | 7449.94 |
| Holin family protein | CRX46_17420 | Not Available | Positive | 3370759 - 3371082 | 11376.8 |
| M15 family metallopeptidase | CRX46_17425 | Not Available | Positive | 3371079 - 3371471 | 14704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





