Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | CRX46_24610 | Not Available | Negative | 4793789 - 4794772 | 36803.9 |
| 50s ribosomal protein l20 | CRX46_24615 | Not Available | Negative | 4795078 - 4795434 | 13497.7 |
| 50s ribosomal protein l35 | CRX46_24620 | Not Available | Negative | 4795488 - 4795685 | 7289.38 |
| translation initiation factor if-3 | CRX46_24625 | Not Available | Negative | 4795782 - 4796324 | 20565.2 |
| threonine--trna ligase | CRX46_24630 | Not Available | Negative | 4796328 - 4798256 | 74018.4 |
| hypothetical protein | CRX46_24640 | Not Available | Positive | 4800843 - 4800950 | 4115.44 |
| duf481 domain-containing protein | CRX46_24645 | Not Available | Negative | 4801003 - 4801761 | 27599.6 |
| exonuclease | CRX46_24650 | Not Available | Positive | 4801946 - 4802085 | 5196.06 |
| excisionase | CRX46_24655 | Not Available | Positive | 4802147 - 4802416 | 10185.4 |
| integrase | CRX46_24660 | Not Available | Positive | 4802385 - 4803503 | 42709.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





