Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | CRX46_23990 | Not Available | Positive | 4666826 - 4667239 | 15455.0 |
| type vi secretion system baseplate subunit tssf | CRX46_23995 | Not Available | Positive | 4667243 - 4669093 | 71102.8 |
| type vi secretion system baseplate subunit tssg | CRX46_24000 | Not Available | Positive | 4669057 - 4670139 | 40258.1 |
| type vi secretion system-associated fha domain protein tagh | CRX46_24005 | Not Available | Positive | 4670164 - 4671444 | 47484.9 |
| type vi secretion system lipoprotein tssj | CRX46_24010 | Not Available | Positive | 4671441 - 4671965 | 19369.0 |
| type vi secretion system baseplate subunit tssk | CRX46_24015 | Not Available | Positive | 4671968 - 4673299 | 49965.8 |
| hypothetical protein | CRX46_24020 | Not Available | Positive | 4673304 - 4674065 | 29373.7 |
| type vi secretion system atpase tssh | CRX46_24025 | Not Available | Positive | 4674074 - 4677001 | 106784.0 |
| type vi secretion system-associated protein tago | CRX46_24030 | Not Available | Positive | 4676998 - 4677741 | 26423.7 |
| type vi secretion system protein tssa | CRX46_24035 | Not Available | Positive | 4677746 - 4679158 | 52281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





