Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl/aryl-sulfatase | CRX46_23925 | Not Available | Positive | 4657010 - 4658986 | 72727.9 |
| ggdef domain-containing protein | CRX46_23930 | Not Available | Positive | 4659081 - 4660130 | 39169.0 |
| hypothetical protein | CRX46_23945 | Not Available | Negative | 4661061 - 4661459 | 15090.2 |
| rhs repeat protein | CRX46_23950 | Not Available | Negative | 4661460 - 4662602 | 43371.9 |
| hypothetical protein | CRX46_23960 | Not Available | Negative | 4662873 - 4663109 | 8683.42 |
| hypothetical protein | CRX46_23965 | Not Available | Negative | 4663149 - 4663286 | 5097.35 |
| type vi secretion system tube protein hcp | CRX46_23970 | Not Available | Negative | 4663319 - 4663837 | 19256.8 |
| type vi secretion system contractile sheath small subunit | CRX46_23975 | Not Available | Positive | 4664534 - 4665034 | 18005.4 |
| hypothetical protein | CRX46_23980 | Not Available | Positive | 4665069 - 4665293 | 8476.09 |
| type vi secretion system contractile sheath large subunit | CRX46_23985 | Not Available | Positive | 4665344 - 4666819 | 55767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





