Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit alpha | CRX46_23230 | Not Available | Negative | 4539150 - 4540691 | 55225.4 |
| atp synthase subunit delta | CRX46_23235 | Not Available | Negative | 4540704 - 4541237 | 19333.3 |
| atp synthase subunit b | CRX46_23240 | Not Available | Negative | 4541252 - 4541722 | 17264.9 |
| atp synthase subunit c | CRX46_23245 | Not Available | Negative | 4541784 - 4542023 | 8256.71 |
| atp synthase subunit a | CRX46_23250 | Not Available | Negative | 4542070 - 4542885 | 30314.1 |
| atp synthase i | CRX46_23255 | Not Available | Negative | 4542894 - 4543274 | 13632.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CRX46_23260 | Not Available | Negative | 4543890 - 4544513 | 23429.5 |
| trna uridine(34) 5-carboxymethylaminomethyl synthesis enzyme mnmg | CRX46_23265 | Not Available | Negative | 4544577 - 4546466 | 69525.4 |
| fmn-binding protein mioc | CRX46_23270 | Not Available | Negative | 4546845 - 4547288 | 15812.5 |
| asnc family transcriptional regulator | CRX46_23275 | Not Available | Negative | 4547378 - 4547836 | 16888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





