Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf416 domain-containing protein | CRX46_23115 | Not Available | Positive | 4516991 - 4517581 | 22613.9 |
| dna-binding protein hu-alpha | CRX46_23120 | Not Available | Positive | 4517768 - 4518040 | 9535.51 |
| duf1481 domain-containing protein | CRX46_23125 | Not Available | Positive | 4518053 - 4518748 | 26352.9 |
| zinc resistance-associated protein zrap | CRX46_23130 | Not Available | Negative | 4518750 - 4519175 | 15231.3 |
| zinc resistance-associated protein | CRX46_23135 | Not Available | Negative | 4519178 - 4519306 | 5010.84 |
| two-component system sensor histidine kinase zras | CRX46_23140 | Not Available | Positive | 4519413 - 4520810 | 51164.1 |
| sigma-54-dependent fis family transcriptional regulator | CRX46_23145 | Not Available | Positive | 4520807 - 4522132 | 48329.4 |
| phosphoribosylamine--glycine ligase | CRX46_23150 | Not Available | Negative | 4522129 - 4523418 | 45971.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | CRX46_23155 | Not Available | Negative | 4523430 - 4525019 | 57357.4 |
| type iii effector protein | CRX46_23165 | Not Available | Negative | 4525619 - 4527377 | 67121.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





