Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--pyruvate transaminase | CRX46_22420 | Not Available | Negative | 4383830 - 4385083 | 46715.9 |
| alpha-amylase | CRX46_22425 | Not Available | Negative | 4385261 - 4387291 | 75813.6 |
| protein bax | CRX46_22430 | Not Available | Positive | 4387611 - 4388435 | 30869.3 |
| xylr family transcriptional regulator | CRX46_22435 | Not Available | Negative | 4388543 - 4389721 | 44871.7 |
| xylose abc transporter permease | CRX46_22440 | Not Available | Negative | 4389799 - 4390980 | 41033.5 |
| xylose abc transporter atp-binding protein | CRX46_22445 | Not Available | Negative | 4390958 - 4392499 | 56471.9 |
| d-xylose abc transporter substrate-binding protein | CRX46_22450 | Not Available | Negative | 4392577 - 4393569 | 35796.2 |
| xylose isomerase | CRX46_22455 | Not Available | Positive | 4393935 - 4395257 | 49702.6 |
| xylulokinase | CRX46_22460 | Not Available | Positive | 4395329 - 4396783 | 52668.4 |
| hypothetical protein | CRX46_22465 | Not Available | Positive | 4396951 - 4397292 | 12550.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





