Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | CRX46_22365 | Not Available | Negative | 4374004 - 4374699 | 25613.5 |
| xylulose 5-phosphate 3-epimerase | CRX46_22370 | Not Available | Negative | 4374693 - 4375553 | 32484.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | CRX46_22375 | Not Available | Negative | 4375546 - 4376208 | 23663.4 |
| carbohydrate kinase | CRX46_22380 | Not Available | Negative | 4376205 - 4377701 | 55039.8 |
| trap transporter substrate-binding protein | CRX46_22385 | Not Available | Negative | 4377705 - 4378691 | 35972.1 |
| transporter | CRX46_22390 | Not Available | Negative | 4378704 - 4379981 | 45385.0 |
| 2,3-diketo-l-gulonate trap transporter permease | CRX46_22395 | Not Available | Negative | 4379984 - 4380457 | 17516.9 |
| yhch/yjgk/yial family protein | CRX46_22400 | Not Available | Negative | 4380575 - 4381042 | 17395.9 |
| 3-dehydro-l-gulonate 2-dehydrogenase | CRX46_22405 | Not Available | Negative | 4381054 - 4382052 | 36573.9 |
| iclr family transcriptional regulator | CRX46_22410 | Not Available | Positive | 4382254 - 4383102 | 31083.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





