Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid occlusion factor slma | CRX46_21885 | Not Available | Negative | 4285284 - 4285880 | 22837.7 |
| dutp diphosphatase | CRX46_21890 | Not Available | Negative | 4285987 - 4286442 | 16157.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | CRX46_21895 | Not Available | Negative | 4286423 - 4287643 | 43466.7 |
| jab domain-containing protein | CRX46_21900 | Not Available | Positive | 4287815 - 4288483 | 25306.0 |
| 50s ribosomal protein l28 | CRX46_21905 | Not Available | Positive | 4288700 - 4288936 | 9007.02 |
| 50s ribosomal protein l33 | CRX46_21910 | Not Available | Positive | 4288957 - 4289124 | 6371.94 |
| formamidopyrimidine-dna glycosylase | CRX46_21915 | Not Available | Positive | 4289222 - 4290031 | 30319.8 |
| phosphopantetheine adenylyltransferase | CRX46_21920 | Not Available | Negative | 4290070 - 4290549 | 17837.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | CRX46_21925 | Not Available | Negative | 4290557 - 4291834 | 47293.9 |
| lipopolysaccharide core heptosyltransferase rfaq | CRX46_21930 | Not Available | Positive | 4292247 - 4293305 | 39476.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





