Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit b | CRX46_18150 | Not Available | Negative | 3508223 - 3510241 | 72700.6 |
| hydrogenase-4 f-s subunit | CRX46_18155 | Not Available | Negative | 3510241 - 3510858 | 22159.5 |
| peroxiredoxin | CRX46_18160 | Not Available | Negative | 3511111 - 3511581 | 17634.9 |
| glycine cleavage system transcriptional repressor | CRX46_18165 | Not Available | Negative | 3511581 - 3512153 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CRX46_18170 | Not Available | Positive | 3512299 - 3513177 | 31266.8 |
| outer membrane protein assembly factor bamc | CRX46_18175 | Not Available | Positive | 3513194 - 3514228 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CRX46_18180 | Not Available | Positive | 3514441 - 3515154 | 26996.5 |
| neutral zinc metallopeptidase | CRX46_18185 | Not Available | Positive | 3515322 - 3516185 | 31462.0 |
| trna(met) cytidine acetyltransferase | CRX46_18190 | Not Available | Positive | 3516200 - 3518215 | 74773.5 |
| esterase | CRX46_18195 | Not Available | Positive | 3518289 - 3518987 | 24849.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





