Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator trer | CRX46_16955 | Not Available | Positive | 3286808 - 3287755 | 34575.8 |
| pts trehalose transporter subunit iibc | CRX46_16960 | Not Available | Positive | 3287874 - 3289295 | 51135.0 |
| alpha,alpha-phosphotrehalase | CRX46_16965 | Not Available | Positive | 3289345 - 3291000 | 63723.9 |
| anaerobic ribonucleoside triphosphate reductase | CRX46_16970 | Not Available | Positive | 3291394 - 3293532 | 80043.0 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | CRX46_16975 | Not Available | Positive | 3293717 - 3294181 | 17430.9 |
| type ii toxin-antitoxin system rele/pare family toxin | CRX46_16980 | Not Available | Negative | 3294182 - 3294472 | 11367.8 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | CRX46_16985 | Not Available | Negative | 3294462 - 3294704 | 9126.09 |
| cytochrome b562 | CRX46_16995 | Not Available | Negative | 3294896 - 3295282 | 13989.7 |
| metalloprotease pmba | CRX46_17000 | Not Available | Negative | 3295466 - 3296818 | 48358.4 |
| duf615 family protein | CRX46_17005 | Not Available | Positive | 3296912 - 3297463 | 21360.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





