Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | CRX46_00160 | Not Available | Negative | 35545 - 36126 | 21252.4 |
| uridine kinase | CRX46_00165 | Not Available | Negative | 36218 - 36859 | 24354.6 |
| diguanylate cyclase | CRX46_00170 | Not Available | Positive | 37177 - 40494 | 123970.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 38659 - 38784 | Not Available |
| dna-3-methyladenine glycosylase 2 | CRX46_00175 | Not Available | Negative | 40532 - 41389 | 31639.3 |
| molecular chaperone | CRX46_00180 | Not Available | Positive | 41523 - 42875 | 49321.1 |
| helix-hairpin-helix domain-containing protein | CRX46_00185 | Not Available | Negative | 42888 - 44828 | 71365.6 |
| duf2314 domain-containing protein | CRX46_00190 | Not Available | Positive | 45026 - 45487 | 17428.8 |
| protein phosphatase 2c domain-containing protein | CRX46_00195 | Not Available | Negative | 45552 - 46313 | 27384.7 |
| vwa domain-containing protein | CRX46_00200 | Not Available | Negative | 46310 - 46969 | 24133.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





