Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulokinase | CRX46_13600 | Not Available | Negative | 2648378 - 2650078 | 61189.7 |
| arabinose operon regulatory protein | CRX46_13610 | Not Available | Positive | 2650417 - 2651295 | 33385.8 |
| deda family protein | CRX46_13615 | Not Available | Positive | 2651381 - 2652145 | 28171.7 |
| thiamine abc transporter atp-binding protein thiq | CRX46_13620 | Not Available | Negative | 2652259 - 2652957 | 25001.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | CRX46_13625 | Not Available | Negative | 2652941 - 2654551 | 59404.6 |
| thiamine abc transporter substrate binding subunit | CRX46_13630 | Not Available | Negative | 2654527 - 2655510 | 36273.3 |
| type iii effector | CRX46_13635 | Not Available | Positive | 2655881 - 2656450 | 21527.2 |
| transcriptional regulator sgrr | CRX46_13640 | Not Available | Negative | 2656680 - 2658338 | 64113.8 |
| glucose uptake inhibitor sgrt | CRX46_13645 | Not Available | Positive | 2658427 - 2658558 | 5324.44 |
| 3-isopropylmalate dehydratase small subunit | CRX46_13650 | Not Available | Negative | 2658666 - 2659271 | 22688.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





