Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | CRX46_19845 | Not Available | Positive | 3837350 - 3837712 | 13686.3 |
| Hypothetical protein | CRX46_19850 | Not Available | Positive | 3837712 - 3838017 | 12161.5 |
| Excisionase | CRX46_19855 | Not Available | Positive | 3837933 - 3838388 | 16961.1 |
| Integrase | CRX46_19860 | Not Available | Positive | 3838244 - 3839407 | 45020.5 |
| Attr | Not Available | Not Available | Positive | 3845469 - 3845480 | Not Available |
| Putative holin | CRX46_26440 | Not Available | Positive | 5103585 - 5103749 | 6193.58 |
| Hypothetical protein | CRX46_26445 | Not Available | Positive | 5103754 - 5104104 | 13081.7 |
| Putative r protein | CRX46_26450 | Not Available | Positive | 5104168 - 5104701 | 19545.5 |
| Outer membrane lytic protein rz | CRX46_26455 | Not Available | Positive | 5105000 - 5105437 | 15975.1 |
| Hypothetical protein | CRX46_26460 | Not Available | Positive | 5105854 - 5106474 | 23406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





