Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase/endonuclease cas3 | CRX46_06925 | Not Available | Positive | 1343706 - 1346405 | 101842.0 |
| type i-e crispr-associated protein cse1/casa | CRX46_06930 | Not Available | Positive | 1346503 - 1348065 | 59169.5 |
| type i-e crispr-associated protein cse2/casb | CRX46_06935 | Not Available | Positive | 1348062 - 1348598 | 20687.6 |
| type i-e crispr-associated protein cas7/cse4/casc | CRX46_06940 | Not Available | Positive | 1348613 - 1349668 | 38432.7 |
| type i-e crispr-associated protein cas5/casd | CRX46_06945 | Not Available | Positive | 1349679 - 1350425 | 28680.1 |
| type i-e crispr-associated protein cas6/cse3/case | CRX46_06950 | Not Available | Positive | 1350407 - 1351057 | 24724.8 |
| type i-e crispr-associated endonuclease cas1 | CRX46_06955 | Not Available | Positive | 1351054 - 1351977 | 33426.7 |
| type i-e crispr-associated endoribonuclease cas2 | CRX46_06960 | Not Available | Positive | 1351974 - 1352267 | 10976.3 |
| aminopeptidase | CRX46_06965 | Not Available | Negative | 1353023 - 1354060 | 37847.2 |
| sulfate adenylyltransferase subunit 2 | CRX46_06970 | Not Available | Positive | 1354312 - 1355220 | 35205.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





