Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | CRX46_06765 | Not Available | Negative | 1313096 - 1314127 | 38353.9 |
| duf1471 domain-containing protein | CRX46_06770 | Not Available | Positive | 1314154 - 1314558 | 14655.7 |
| tonb-dependent siderophore receptor | CRX46_06775 | Not Available | Positive | 1314823 - 1317105 | 81904.4 |
| fe2+-dependent dioxygenase | CRX46_06780 | Not Available | Positive | 1317147 - 1317824 | 25561.3 |
| dksa/trar family c4-type zinc finger protein | CRX46_06785 | Not Available | Positive | 1317898 - 1318164 | 9804.42 |
| hypothetical protein | CRX46_06790 | Not Available | Positive | 1318429 - 1318689 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | CRX46_06795 | Not Available | Negative | 1318828 - 1319913 | 38919.3 |
| dna-binding protein ybib | CRX46_06800 | Not Available | Negative | 1320054 - 1321016 | 35059.6 |
| atp-dependent dna helicase ding | CRX46_06805 | Not Available | Negative | 1321044 - 1323194 | 81508.0 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | CRX46_06815 | Not Available | Negative | 1323365 - 1323646 | 10651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





