Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CRX46_06295 | Not Available | Negative | 1216788 - 1218623 | 72179.9 |
| alpa family transcriptional regulator | CRX46_06300 | Not Available | Positive | 1218724 - 1219011 | 10738.9 |
| duf3987 domain-containing protein | CRX46_06305 | Not Available | Positive | 1218983 - 1220512 | 57912.3 |
| integrase | CRX46_06310 | Not Available | Negative | 1220682 - 1221899 | 45981.4 |
| hypothetical protein | CRX46_06320 | Not Available | Positive | 1222485 - 1222694 | 8168.09 |
| atp-dependent clp protease atp-binding subunit clpa | CRX46_06325 | Not Available | Negative | 1222773 - 1225049 | 84211.9 |
| atp-dependent clp protease adaptor clps | CRX46_06330 | Not Available | Negative | 1225080 - 1225400 | 12179.7 |
| cold-shock protein cspd | CRX46_06335 | Not Available | Positive | 1225723 - 1225947 | 7969.41 |
| macrolide abc transporter atp-binding protein/permease macb | CRX46_06340 | Not Available | Negative | 1226020 - 1227966 | 70648.7 |
| maca family efflux pump subunit | CRX46_06345 | Not Available | Negative | 1227963 - 1229078 | 40656.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





