Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | CRX46_05805 | Not Available | Negative | 1116866 - 1117333 | 18658.8 |
| escn/yscn/hrcn family type iii secretion system atpase | CRX46_05810 | Not Available | Negative | 1117314 - 1118633 | 48535.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | CRX46_05815 | Not Available | Negative | 1118638 - 1120698 | 76435.6 |
| yopn family type iii secretion system gatekeeper subunit | CRX46_05820 | Not Available | Negative | 1120691 - 1121836 | 43514.6 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | CRX46_05825 | Not Available | Negative | 1121841 - 1123544 | 62757.4 |
| arac family transcriptional regulator | CRX46_05830 | Not Available | Negative | 1123541 - 1124290 | 28286.4 |
| ghot/ortt family toxin | CRX46_05835 | Not Available | Negative | 1124636 - 1124815 | 6628.51 |
| hypothetical protein | CRX46_05840 | Not Available | Negative | 1124881 - 1126533 | 62126.8 |
| Trna-gly | Not Available | Not Available | Positive | 1126724 - 1126797 | Not Available |
| hypothetical protein | CRX46_05850 | Not Available | Negative | 1126876 - 1127628 | 26452.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





