Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2009-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309359 bp
Thymine Count
1314113 bp
Guanine Count
1340305 bp
Cytosine Count
1355047 bp
Genome Length
5319417 bp
Protein-coding Genes
4965 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase | CRX46_05030 | Not Available | Positive | 954885 - 955679 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | CRX46_05035 | Not Available | Positive | 955741 - 958413 | 102419.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CRX46_05040 | Not Available | Positive | 958444 - 959268 | 29892.8 |
| hypothetical protein | CRX46_05045 | Not Available | Positive | 959582 - 959968 | 15097.0 |
| carbohydrate diacid regulon transcriptional regulator cdar | CRX46_05050 | Not Available | Negative | 960022 - 961179 | 43660.1 |
| periplasmic serine endoprotease degp | CRX46_05055 | Not Available | Negative | 961334 - 962758 | 49371.3 |
| dgtpase | CRX46_05065 | Not Available | Negative | 962888 - 964405 | 59398.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CRX46_05070 | Not Available | Positive | 964489 - 965187 | 24355.4 |
| cobalamin-binding protein | CRX46_05075 | Not Available | Positive | 965180 - 965980 | 29352.4 |
| hypothetical protein | CRX46_05080 | Not Available | Positive | 966018 - 966641 | 22129.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





