Photorhabdus bodei strain LJ24-63

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus bodei strain LJ24-63 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contribute to its motility. This strain possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for its adaptability and survival in various environments. The genomic data for this strain is cataloged under the accession number NSCM00000000.1. Given its classification within the Photorhabdus genus, this strain is likely to exhibit traits typical of entomopathogenic bacteria, which often form symbiotic relationships with nematodes. These interactions are significant in the biological control of insect pests, providing an ecological role in regulating pest populations. The motility conferred by flagella may enhance its ability to colonize host organisms or navigate through various environments, supporting its life cycle and symbiotic relationships. The traits of Photorhabdus bodei strain LJ24-63 highlight its potential utility in biocontrol strategies, particularly in agriculture, where managing pest populations is crucial for sustainable practices. Further research into its specific interactions within ecosystems could elucidate its contributions to microbial diversity and its role in agricultural health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus bodei
Strainstrain LJ24-63

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus bodei strain LJ24-63
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus bodei strain LJ24-63 LJ_63_scf0192, whole genome

Gene Summary

Adenine Count

1446764 bp

Thymine Count

1451904 bp

Guanine Count

1077647 bp

Cytosine Count

1083383 bp

Genome Length

5059726 bp

Protein-coding Genes

3932 genes

Non-Coding Genes

323 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator nadrCKY02_18390Not AvailablePositive4178843 - 418007847731.7
lipoprotein abc transporter atp-binding proteinCKY02_18395Not AvailablePositive4180754 - 418150027774.8
energy-dependent translational throttle protein ettaCKY02_18400Not AvailableNegative4181539 - 418320662601.6
murein transglycosylaseCKY02_18405Not AvailablePositive4183578 - 418549472899.1
trp operon repressorCKY02_18410Not AvailablePositive4185554 - 418587411997.5
non-canonical purine ntp phosphataseCKY02_18415Not AvailableNegative4185910 - 418644019680.6
phosphoglycerate mutaseCKY02_18420Not AvailablePositive4186495 - 418714223989.9
mdr efflux pump acrab transcriptional activator robaCKY02_18425Not AvailableNegative4187139 - 418801433765.1
hypothetical proteinCKY02_18430Not AvailablePositive4188521 - 418900617667.7
two-component system response regulator arcaCKY02_18435Not AvailableNegative4189200 - 418991627297.8

Displaying genes 3491 – 3500 of 4255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.