Photorhabdus bodei strain LJ24-63

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus bodei strain LJ24-63 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contribute to its motility. This strain possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for its adaptability and survival in various environments. The genomic data for this strain is cataloged under the accession number NSCM00000000.1. Given its classification within the Photorhabdus genus, this strain is likely to exhibit traits typical of entomopathogenic bacteria, which often form symbiotic relationships with nematodes. These interactions are significant in the biological control of insect pests, providing an ecological role in regulating pest populations. The motility conferred by flagella may enhance its ability to colonize host organisms or navigate through various environments, supporting its life cycle and symbiotic relationships. The traits of Photorhabdus bodei strain LJ24-63 highlight its potential utility in biocontrol strategies, particularly in agriculture, where managing pest populations is crucial for sustainable practices. Further research into its specific interactions within ecosystems could elucidate its contributions to microbial diversity and its role in agricultural health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus bodei
Strainstrain LJ24-63

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus bodei strain LJ24-63
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus bodei strain LJ24-63 LJ_63_scf0192, whole genome

Gene Summary

Adenine Count

1446764 bp

Thymine Count

1451904 bp

Guanine Count

1077647 bp

Cytosine Count

1083383 bp

Genome Length

5059726 bp

Protein-coding Genes

3932 genes

Non-Coding Genes

323 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna repair proteinCKY02_17550Not AvailablePositive3950214 - 395287799574.2
transcriptional regulatorCKY02_17555Not AvailablePositive3952904 - 395412446118.8
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeCKY02_17560Not AvailableNegative3954301 - 395566549445.1
membrane protein insertase yidcCKY02_17565Not AvailableNegative3955782 - 395742261337.4
membrane protein insertion efficiency factor yiddCKY02_17570Not AvailableNegative3957425 - 39576859595.78
ribonuclease p protein componentCKY02_17575Not AvailableNegative3957649 - 395800813992.3
50s ribosomal protein l34CKY02_17580Not AvailableNegative3958025 - 39581655426.77
chromosomal replication initiator protein dnaaCKY02_17585Not AvailablePositive3958856 - 396024452352.5
dna polymerase iii subunit betaCKY02_17590Not AvailablePositive3960249 - 396134941031.4
dna replication/repair protein recfCKY02_17595Not AvailablePositive3961371 - 396246241320.4

Displaying genes 3351 – 3360 of 4255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.