Photorhabdus bodei strain LJ24-63

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus bodei strain LJ24-63 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contribute to its motility. This strain possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for its adaptability and survival in various environments. The genomic data for this strain is cataloged under the accession number NSCM00000000.1. Given its classification within the Photorhabdus genus, this strain is likely to exhibit traits typical of entomopathogenic bacteria, which often form symbiotic relationships with nematodes. These interactions are significant in the biological control of insect pests, providing an ecological role in regulating pest populations. The motility conferred by flagella may enhance its ability to colonize host organisms or navigate through various environments, supporting its life cycle and symbiotic relationships. The traits of Photorhabdus bodei strain LJ24-63 highlight its potential utility in biocontrol strategies, particularly in agriculture, where managing pest populations is crucial for sustainable practices. Further research into its specific interactions within ecosystems could elucidate its contributions to microbial diversity and its role in agricultural health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus bodei
Strainstrain LJ24-63

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus bodei strain LJ24-63
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus bodei strain LJ24-63 LJ_63_scf0192, whole genome

Gene Summary

Adenine Count

1446764 bp

Thymine Count

1451904 bp

Guanine Count

1077647 bp

Cytosine Count

1083383 bp

Genome Length

5059726 bp

Protein-coding Genes

3932 genes

Non-Coding Genes

323 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine transporter lyseCKY02_08380Not AvailablePositive1907836 - 190845022353.5
carbamoyl phosphate synthase large subunitCKY02_08385Not AvailableNegative1908768 - 1911992118124.0
carbamoyl-phosphate synthase small subunitCKY02_08390Not AvailableNegative1912008 - 191317142397.9
4-hydroxy-tetrahydrodipicolinate reductaseCKY02_08395Not AvailableNegative1913607 - 191442828808.6
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseCKY02_08400Not AvailableNegative1914521 - 191547434958.7
peptidylprolyl isomeraseCKY02_08405Not AvailableNegative1915455 - 191592516987.0
signal peptidase iiCKY02_08410Not AvailableNegative1915931 - 191643418803.3
isoleucine--trna ligaseCKY02_08415Not AvailableNegative1916434 - 1919247105162.0
riboflavin biosynthesis protein ribfCKY02_08420Not AvailableNegative1919272 - 192021634869.4
30s ribosomal protein s20CKY02_08430Not AvailablePositive1920567 - 19208279723.92

Displaying genes 1751 – 1760 of 4255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.