Photorhabdus sp. S9-53

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S9-53 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella. This motility feature suggests an ability to navigate through its environment, which can be critical for its ecological interactions. The organism possesses a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in various environments. The genomic data for Photorhabdus sp. S9-53 is cataloged under the accession number NSCK00000000.1, which provides a reference point for further research and comparative studies within the genus Photorhabdus. Photorhabdus species are often associated with entomopathogenic nematodes and play a significant role in the biological control of insect pests. Their ecological importance stems from their ability to produce a range of bioactive compounds, which can be beneficial for pest management and agricultural practices. The traits of Photorhabdus sp. S9-53, particularly its motility and genetic characteristics, may enhance its effectiveness in these roles, potentially impacting both pest populations and the broader ecosystem dynamics. Understanding the specific capabilities and interactions of this strain can contribute to the development of sustainable pest control strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S9-53
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S9-53
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S9-53 S9_53_scf0197, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4216 genes

Non-Coding Genes

388 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yopn family type iii secretion system gatekeeper subunitCKY03_18580Not AvailablePositive4181044 - 418191632110.3
tyea family type iii secretion system gatekeeper subunitCKY03_18585Not AvailablePositive4181897 - 418218410843.8
type iii secretion chaperone sycnCKY03_18590Not AvailablePositive4182181 - 418255214154.3
yscx family type iii secretion proteinCKY03_18595Not AvailablePositive4182549 - 418291413484.3
type iii secretion proteinCKY03_18600Not AvailablePositive4182917 - 418324612175.8
escv/yscv/hrcv family type iii secretion system export apparatus proteinCKY03_18605Not AvailablePositive4183294 - 418536075479.6
type iii secretion system regulator lcrrCKY03_18610Not AvailablePositive4185357 - 418579116822.3
type iii secretion protein lcrgCKY03_18615Not AvailablePositive4185832 - 418611010433.6
virulence factorCKY03_18620Not AvailablePositive4186122 - 418704834407.8
cesd/sycd/lcrh family type iii secretion system chaperoneCKY03_18625Not AvailablePositive4187058 - 418756718648.7

Displaying genes 3651 – 3660 of 4615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.