Photorhabdus sp. S10-54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S10-54 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enables motility. This species is noteworthy for possessing a single replicon, a feature that can impact its genetic stability and replication processes. Its genomic information is catalogued under the accession number NSCJ00000000.1, which provides a basis for further research and characterization. The presence of flagella in Photorhabdus sp. S10-54 suggests that it may exhibit mobility in various environments, which could be advantageous for survival and colonization. Gram-negative bacteria, such as this species, typically have a complex cell wall structure that includes an outer membrane, which may play a role in antibiotic resistance and interactions with other microorganisms. Photorhabdus species are often associated with insect pathogens, particularly in relation to entomopathogenic nematodes. This ecological relationship highlights the potential role of Photorhabdus sp. S10-54 in biological control processes, where it may contribute to the regulation of insect populations. The specific traits of Photorhabdus sp. S10-54 suggest that it could be an important player in its ecosystem, potentially influencing both microbial dynamics and pest management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S10-54
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S10-54
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S10-54 S10_54_scf0197, whole genome shotgun

Gene Summary

Adenine Count

1540164 bp

Thymine Count

1518102 bp

Guanine Count

1120122 bp

Cytosine Count

1135579 bp

Genome Length

5314371 bp

Protein-coding Genes

4179 genes

Non-Coding Genes

422 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose abc transporter substrate-binding protein rbsbCKY05_20790Not AvailableNegative4670718 - 467160831300.2
ribose abc transporter permeaseCKY05_20795Not AvailableNegative4671633 - 467260433973.8
ribose abc transporter atp-binding protein rbsaCKY05_20800Not AvailableNegative4672611 - 467411655028.4
d-ribose pyranaseCKY05_20805Not AvailableNegative4674124 - 467454315262.6
atpase ravaCKY05_20810Not AvailablePositive4674808 - 467631058600.5
atpase rava stimulator viaaCKY05_20815Not AvailablePositive4676315 - 467777256295.0
aspartate--ammonia ligaseCKY05_20820Not AvailableNegative4677779 - 467877137169.6
transcriptional regulator asncCKY05_20825Not AvailablePositive4678938 - 467939917310.2
fmn-binding protein miocCKY05_20830Not AvailablePositive4679491 - 467993115841.6
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgCKY05_20835Not AvailablePositive4680312 - 468220170561.6

Displaying genes 4041 – 4050 of 4601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.