Photorhabdus sp. S10-54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S10-54 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enables motility. This species is noteworthy for possessing a single replicon, a feature that can impact its genetic stability and replication processes. Its genomic information is catalogued under the accession number NSCJ00000000.1, which provides a basis for further research and characterization. The presence of flagella in Photorhabdus sp. S10-54 suggests that it may exhibit mobility in various environments, which could be advantageous for survival and colonization. Gram-negative bacteria, such as this species, typically have a complex cell wall structure that includes an outer membrane, which may play a role in antibiotic resistance and interactions with other microorganisms. Photorhabdus species are often associated with insect pathogens, particularly in relation to entomopathogenic nematodes. This ecological relationship highlights the potential role of Photorhabdus sp. S10-54 in biological control processes, where it may contribute to the regulation of insect populations. The specific traits of Photorhabdus sp. S10-54 suggest that it could be an important player in its ecosystem, potentially influencing both microbial dynamics and pest management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S10-54
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S10-54
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S10-54 S10_54_scf0197, whole genome shotgun

Gene Summary

Adenine Count

1540164 bp

Thymine Count

1518102 bp

Guanine Count

1120122 bp

Cytosine Count

1135579 bp

Genome Length

5314371 bp

Protein-coding Genes

4179 genes

Non-Coding Genes

422 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chitin-binding proteinCKY05_14765Not AvailableNegative3413525 - 341412422472.5
oligopeptide abc transporter substrate-binding protein oppaCKY05_14770Not AvailableNegative3414585 - 341619260458.3
dimethyl sulfoxide reductase subunit aCKY05_14775Not AvailablePositive3416718 - 341915090679.3
gamma-aminobutyraldehyde dehydrogenaseCKY05_14780Not AvailablePositive3419658 - 342108851424.8
polyketide cyclaseCKY05_14785Not AvailablePositive3421104 - 342187729239.3
4-aminobutyrate--2-oxoglutarate transaminaseCKY05_14790Not AvailablePositive3422056 - 342333345670.3
hypothetical proteinCKY05_14795Not AvailablePositive3423367 - 342373514258.6
fad-dependent oxidoreductaseCKY05_14800Not AvailablePositive3423793 - 342533455358.1
3-ketoacyl-acp reductaseCKY05_14805Not AvailablePositive3425608 - 342637826232.9
hypothetical proteinCKY05_14810Not AvailableNegative3426582 - 342726525387.5

Displaying genes 2981 – 2990 of 4601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.